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project:openfooddna [2015/06/06 12:33] – heluc | project:openfooddna [2015/06/06 13:44] – heluc | ||
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===== Open Food DNA ===== | ===== Open Food DNA ===== | ||
- | The basic idea is to create | + | The basic idea is to carry out a citizen science project to compile |
- | Take beer. The assumption is that the DNA content (genetic or genomic information | + | Many more details |
- | We want to build a data workflow from sampling to visualisation to communicate this idea to the public. | + | Take beer. The assumption is that the DNA content (genetic or genomic information about every single living organism that was present during the brewing) may correlate with the type and taste of the brew. |
Somebody else (at a [[http:// | Somebody else (at a [[http:// | ||
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===== Data ===== | ===== Data ===== | ||
+ | |||
+ | Since we do not have data yet, we generated a random dataset using this Octave/ | ||
+ | (generates a random data table and calculate the euclidian distance matrix) | ||
+ | |||
+ | # | ||
+ | % lines : beer samble | ||
+ | li = 10; | ||
+ | % columns : species and sub species | ||
+ | co = 30; | ||
+ | M = round(rand(li, | ||
+ | O = zeros(li); | ||
+ | for i = 1:li | ||
+ | for j = 1:i | ||
+ | O(i,j) = norm( M(:, | ||
+ | endfor | ||
+ | endfor | ||
+ | O | ||
+ | |||
+ | We searched for metadata to add to the data generated and making it look more real. Few of our findings: | ||
* American beers metadata | * American beers metadata | ||
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Download data [[http:// | Download data [[http:// | ||
+ | |||
===== Team ===== | ===== Team ===== | ||
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* [[user: | * [[user: | ||
* and other team members | * and other team members | ||
+ | |||
===== Links ===== | ===== Links ===== | ||